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BibliographyAbbott, A.
Altschul, S. F. 1989 "Gap Costs for Multiple Sequence Alignment." Journal of Theoretical Biology 138:297-309.
Amir, A., and G. M. Landau. 1991. "Fast Parallel and Serial Multidimensional Approximate Array Matching. Theoretical Computer Science 81:97-115. Doolittle, R. F. ed. 1990. Methods in Enzymology San diego: Academic Ehrenfeucht, A., and D. Haussler. 1988. "A New Distance Metric on Strings Computable in Linear Time." Discrete Applied Mathematics 20:191-203. Forrest, J., and A. Abbott. 1990. "The Optimal Matching Method for Anthropological Data: An Introduction and Reliability Analysis" Journal of Quantitative Anthropology 2:151-170. Gribskov, M., and J. Devereux. 1992. Sequence Analysis Primer New York: Freeman. Hein, J. 1989. "A New Method that Simultaneously Aligns and Reconstructs Ancestral Sequences for Any Number of Homologous Sequences, When the Phylogeny is Given. Molecular Biology and Evolution 66:649-668. Lawrence, C. B., and D. A. Goldman. 1988. "Definition and Identification of Homology Domains." Cabios 4:1, 25-33. Lawrence, C. E., S. F. Altschul, M. S. Boguski, J. S. Liu, A. F. Neuwald, and J. C. Wooton. 1993. "Detecting Subtle Sequence Signals." Science 262:208-214. Levenshtein, V. I. 1965. "Binary Codes Capable of Correcting Spurious Insertions and Reversals." Cybernetics and Control Theory 10:707-710. Lipman, D. J., S. F. Altschul, and J. D. Kececioglu. 1989. "A Tool for Multiple Sequence Alignment." Proceedings of the National Academy of Science. 86:4412-4415. Miura, R. M. ed. 1986. Some Mathematical Questions in Biology: DNA Sequence Analysis. Providence: American Mathematical Society. Sali, A. and T. L. Blundell. 1990. "Definition of General Topological Equivalence in Protein Structure. Journal of Molecular Biology 212:403-428. Sankoff, D. 1985. "Simultaneous Solution of the RNA Folding, Alignment and Protosequence Problems." SIAM Journal of Applied Mathematics 45:810-825.
Vingron, M., and M. S. Waterman. 1994. "Sequence Alignment and Penalty Choice." Journal of Molecular Biology 235:1-12. Weir, B. S. 1988. "Statistical Analysis of DNA Sequences." Journal of the National Cancer Institute 80:395-406. Zhang, K., and D. Shasha. 1989. "Simple Fast Algorithms for the Editing Distance Between Trees and Related Problems." SIAM Journal of Computing 18:1245-1262. |
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