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PROGRAM OPTIMIZE

Andrew Abbott

Introduction

OPTIMIZE is a program for optimal matching and alignment of sequences. Optimal alignment is a technique for finding measures of resemblance between sequence data. The following short manual gives instructions for using the present program. For general introductions to the algorithms, see references (1997) or references (2002).

Documentation:

Preliminary Notes

Biological Software Currently Available

Introduction to the OPTIMIZE Algorithm

Implementation

Limits

Final Matters


Back to Top Preliminary Notes

Contact Information:
Address: 1126 E 59th St. Chicago, IL 60637
Office: (773) 702-4545 Fax: (773) 702-4849
Email to: a-abbott@uchicago.edu